spark_auto_mapper_fhir.backbone_elements.molecular_sequence_structure_variant¶
Module Contents¶
Classes¶
MolecularSequence.StructureVariant |
- class spark_auto_mapper_fhir.backbone_elements.molecular_sequence_structure_variant.MolecularSequenceStructureVariant(*, id_=None, extension=None, modifierExtension=None, variantType=None, exact=None, length=None, outer=None, inner=None)¶
Bases:
spark_auto_mapper_fhir.base_types.fhir_backbone_element_base.FhirBackboneElementBase- MolecularSequence.StructureVariant
Raw data describing a biological sequence.
Raw data describing a biological sequence.
- param id_
None
- param extension
May be used to represent additional information that is not part of the basic
definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
- param modifierExtension
May be used to represent additional information that is not part of the basic
definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element’s descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.
Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).
- param variantType
Information about chromosome structure variation DNA change type.
- param exact
Used to indicate if the outer and inner start-end values have the same
- meaning.
- param length
Length of the variant chromosome.
- param outer
Structural variant outer.
- param inner
Structural variant inner.
- Parameters
id_ (Optional[spark_auto_mapper_fhir.fhir_types.string.FhirString]) –
extension (Optional[spark_auto_mapper_fhir.fhir_types.list.FhirList[spark_auto_mapper_fhir.extensions.extension_base.ExtensionBase]]) –
modifierExtension (Optional[spark_auto_mapper_fhir.fhir_types.list.FhirList[spark_auto_mapper_fhir.extensions.extension_base.ExtensionBase]]) –
variantType (Optional[spark_auto_mapper_fhir.complex_types.codeable_concept.CodeableConcept[spark_auto_mapper_fhir.value_sets.generic_type.GenericTypeCode]]) –
exact (Optional[spark_auto_mapper_fhir.fhir_types.boolean.FhirBoolean]) –
length (Optional[spark_auto_mapper_fhir.fhir_types.integer.FhirInteger]) –
outer (Optional[spark_auto_mapper_fhir.backbone_elements.molecular_sequence_outer.MolecularSequenceOuter]) –
inner (Optional[spark_auto_mapper_fhir.backbone_elements.molecular_sequence_inner.MolecularSequenceInner]) –